miRBase entry: hsa-mir-548n

Stem-loop hsa-mir-548n


Accession
MI0006399
Symbol
HGNC: MIR548N
Description
Homo sapiens hsa-mir-548n precursor miRNA
Gene family
MIPF0000317; mir-548

Literature search
47 open access papers mention hsa-mir-548n
(158 sentences)

Sequence

683 reads, 108 reads per million, 72 experiments
agguuggugCAAAAGUAAUUGUGGAUUUUGUcguuaaaaauagcaaaacccgcaauuacuuuugcaccaaccuaa
((((((((((((((((((((((((.((((((.(((...))).)))))).))))))))))))))))))))))))..

Structure
--                        A      c   a 
  agguuggugCAAAAGUAAUUGUGG UUUUGU guu  
  |||||||||||||||||||||||| |||||| ||| a
  uccaaccacguuuucauuaacgcc aaaacg uaa  
aa                        c      a   a 


Annotation confidence Not enough data
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Genome context
chr7: 34940760-34940834 [-]

Disease association
hsa-mir-548n is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-548n

Accession MIMAT0005916
Description Homo sapiens hsa-miR-548n mature miRNA
Sequence 10 - CAAAAGUAAUUGUGGAUUUUGU - 31
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 18285502
    Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells
    "Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA"
    "Genome Res (2008) 18:610-621