Deep sequencing reads for stem-loop sequence MI0011114

Stem-loop ID

crm-mir-71

Reads

                              crm-miR-71-5p                       crm-miR-71-3p                                           Count     RPM (mean number of reads per million)
.............................UGAAAGACAUGGGUAGUG.........................................................................  11        1.27e+03
.............................UGAAAGACAUGGGUAGUGAGAC.....................................................................  1         115
.............................UGAAAGACAUGGGUAGUGAG.......................................................................  1         115
..................................................................UAUCACUAUUCUGUUUUUCGCC................................  1         115
CGUGUCUGUACCACCAAACACUCGAACGAUGAAAGACAUGGGUAGUGAGACGUCGGAGCCUCGUCGUAUCACUAUUCUGUUUUUCGCCGGUCUUGUGAUAUACCAUGUGUCAGAUUUACG
(((((((((((.......(((..((.((.(((((((((.(((((((((.(((.(((....))).))).)))))))))))))))))).)).))..))).........))).)))))..))) (-39.09)

Filter reads

by experiment

Accession	Read count	Tissue	Link	Comment	Reference
ER0000000026	393	whole body	GEO : GSM378786		[ de Wit E et al.]

References

1. PMID:19755563 "Repertoire and evolution of miRNA genes in four divergent nematode species" de Wit E, Linsen SE, Cuppen E, Berezikov E Genome Res. 19:2064-2074(2009).