miRNA Search Results

Deep sequencing reads for stem-loop sequence MI0011151
Stem-loop ID	ppc-mir-71
Reads	ppc-miR-71 Count RPM (mean number of reads per million) ...........................UGAAAGACCUGUUGGUAGUGAGACG............................................................. 2 218 ...........................UGAAAGACCUGUUGGUAGUGAGAC.............................................................. 1 109 GUCGUGUCGACGACCGACGAGCGAAGGUGAAAGACCUGUUGGUAGUGAGACGAUGAAAUUUAAUCCUUUCGUAUCACUACCCAGGCUUUCGCCCUUGCUUCGGUACAAUGGCC (((((.......(((((..(((((.((((((((.((((..((((((((.((((...............)))).)))))))))))))))))))).))))))))))...))))). (-50.36)

                                ppc-miR-71                                                                        Count     RPM (mean number of reads per million)
...........................UGAAAGACCUGUUGGUAGUGAGACG.............................................................  2         218
...........................UGAAAGACCUGUUGGUAGUGAGAC..............................................................  1         109
GUCGUGUCGACGACCGACGAGCGAAGGUGAAAGACCUGUUGGUAGUGAGACGAUGAAAUUUAAUCCUUUCGUAUCACUACCCAGGCUUUCGCCCUUGCUUCGGUACAAUGGCC
(((((.......(((((..(((((.((((((((.((((..((((((((.((((...............)))).)))))))))))))))))))).))))))))))...))))). (-50.36)

miRBase

Deep sequencing reads for stem-loop sequence MI0011151

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References

References
1	PMID:19755563 "Repertoire and evolution of miRNA genes in four divergent nematode species" de Wit E, Linsen SE, Cuppen E, Berezikov E Genome Res. 19:2064-2074(2009).