Deep sequencing reads for mature sequence MIMAT0004313

Stem-loop ID

ath-MIR865

Mature ID

ath-miR865-5p

Reads

        ath-miR865-5p                                                                                      ath-miR865-3p                        Count     RPM (mean number of reads per million)
.AUCUGGGAUGAAUUUGGAUCU........................................................................................................................  9         182
..UCUGGGAUGAAUUUGGAUCU........................................................................................................................  2         0.481
..............UUGGAUCUAAUUGAGCAAAAA...........................................................................................................  1         31.4
GAUCUGGGAUGAAUUUGGAUCUAAUUGAGCAAAAAAUUGUGUUUUUUCAAUCUAUUGAAUUUCACAUCCUUAAACCCUUGCAUAUUCAAUCUAUUGAAUUUCGCAUAUUUUUCCUCAAAUUUAUCCAAAAUCAUCCCAAAUC
(((.((((((((.(((((((..(.(((((.(((((..((((....((((((..(((((((....((............))...)))))))..))))))...))))..))))).))))).)..))))))).)))))))).))) (-43.00)

Filter reads

by experiment

Accession	Read count	Tissue	Link	Comment	Reference
ER0000000003	2	whole body	GEO : GSM253622		[ Mi S et al.]
ER0000000004	9	whole body	GEO : GSM253623		[ Mi S et al.]
ER0000000006	1	whole body	GEO : GSM253625		[ Mi S et al.]

References

1. PMID:18342361 "Sorting of small RNAs into Arabidopsis argonaute complexes is directed by the 5' terminal nucleotide" Mi S, Cai T, Hu Y, Chen Y, Hodges E, Ni F, Wu L, Li S, Zhou H, Long C, Chen S, Hannon GJ, Qi Y. Cell. 133:116-127(2008).