Deep sequencing reads for mature sequence MIMAT0004855

Stem-loop ID mmu-mir-876
Mature ID mmu-miR-876-3p
Reads 
          mmu-miR-876-5p                         mmu-miR-876-3p                     Count     RPM (mean number of reads per million)
..........UGGAUUUCUCUGUGAAUCACU..................................................  15        1.12
..........UGGAUUUCUCUGUGAAUCACUA.................................................  2         0.0921
..........UGGAUUUCUCUGUGAAUCAC...................................................  2         0.0967
..........UGGAUUUCUCUGUGAAUC.....................................................  1         0.0631
..........UGGAUUUCUCUGUGAAUCA....................................................  1         0.017
...........GGAUUUCUCUGUGAAUCACUA.................................................  1         0.017
...........GGAUUUCUCUGUGAAUCACU..................................................  1         0.017
...................................................GUGGUUUACAAAGUAAUUC...........  1         0.017
UCACGUGCUAUGGAUUUCUCUGUGAAUCACUAUAUCAAAUCUAGUGUGGUAGUGGUUUACAAAGUAAUUCAUAGUGCUUCA
....(..(((((((((.((.(((((((((((((..((.......))..))))))))))))).)).)))))))))..).... (-31.20)

Filter reads

by experiment
Accession Read count Tissue Link Comment Reference
ER0000000037 3brain GEO : GSM510441 [ Chiang HR et al.]
ER0000000038 3brain GEO : GSM510442 [ Chiang HR et al.]
ER0000000040 9brain GEO : GSM510444 [ Chiang HR et al.]
ER0000000042 1whole body GEO : GSM510446 newborn [ Chiang HR et al.]
ER0000000046 1whole body GEO : GSM510450 Newborn. [ Chiang HR et al.]
ER0000000047 1whole body GEO : GSM510451 Newborn. [ Chiang HR et al.]
ER0000000048 1whole body GEO : GSM510452 Newborn. [ Chiang HR et al.]
ER0000000052 1whole body GEO : GSM510456 Newborn. [ Chiang HR et al.]
ER0000000055 2embryo GEO : GSM510459 day 12.5 embryo [ Chiang HR et al.]
ER0000000063 1embryo GEO : GSM510467 day 7.5 embryo [ Chiang HR et al.]
ER0000000236 1spleen GEO : GSM539855 strain: RAG-/-, gender: male
by # mismatches     Display untemplated ends
by read count min max

References

1
PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).