Deep sequencing reads for mature sequence MIMAT0011572

Stem-loop ID crm-mir-246-2
Mature ID crm-miR-246-3p
Reads 
                    crm-miR-246-5p                       crm-miR-246-3p                           Count     RPM (mean number of reads per million)
....................ACCUGGCCGAUUUCAUGU..........................................................  1         115
AGUCCAAACAAUAGAACAGCACCUGGCCGAUUUCAUGUAAUAUCUGAAAAGAAAAGAUAUUACAUGUAUCGGGUAGGAGCUGUUUGAGUAAAGGAU
.((((........(((((((.((((.(((((..((((((((((((.........)))))))))))).))))).)))).))))))).......)))) (-42.76)
Stem-loop ID crm-mir-246-1
Mature ID crm-miR-246-3p
Reads 
                    crm-miR-246-5p                       crm-miR-246-3p                           Count     RPM (mean number of reads per million)
....................ACCUGGCCGAUUUCAUGU..........................................................  1         115
AGUCCAAACAAUAGAACAGCACCUGGCCGAUUUCAUGUAAUAUCUGAAAAGAAAAGAUAUUACAUGUAUCGGGUAGGAGCUGUUUGAGUAAAGGAU
.((((........(((((((.((((.(((((..((((((((((((.........)))))))))))).))))).)))).))))))).......)))) (-42.76)

Filter reads

by experiment
Accession Read count Tissue Link Comment Reference
ER0000000026 21whole body GEO : GSM378786 [ de Wit E et al.]
by # mismatches     Display untemplated ends
by read count min max

References

1
PMID:19755563 "Repertoire and evolution of miRNA genes in four divergent nematode species" de Wit E, Linsen SE, Cuppen E, Berezikov E Genome Res. 19:2064-2074(2009).