Deep sequencing reads for mature sequence MIMAT0013623

Stem-loop ID

bmo-mir-2756

Mature ID

bmo-miR-2756-5p

Reads

         bmo-miR-2756-5p                    bmo-miR-2756-3p                     Count     RPM (mean number of reads per million)
.........CACCCUGUAGCUGCCAAGGGGCG.............................................  7         2.89
.........CACCCUGUAGCUGCCAAGGG................................................  1         0.233
..........ACCCUGUAGCUGCCAAGGGGCG.............................................  12879     4.47e+03
..........ACCCUGUAGCUGCCAAGGGGC..............................................  381       147
..........ACCCUGUAGCUGCCAAGGGG...............................................  64        24.4
..........ACCCUGUAGCUGCCAAGGG................................................  52        20.9
..........ACCCUGUAGCUGCCAAGGGGCGC............................................  23        6.63
..........ACCCUGUAGCUGCCAAGG.................................................  11        6.96
..........ACCCUGUAGCUGCCAAGGGGCGCA...........................................  1         0.861
...........CCCUGUAGCUGCCAAGGGGCG.............................................  50        20.5
...........CCCUGUAGCUGCCAAGGGG...............................................  1         0.861
...........CCCUGUAGCUGCCAAGGGGC..............................................  1         0.233
...........CCCUGUAGCUGCCAAGGGGCGCA...........................................  1         0.233
............CCUGUAGCUGCCAAGGGGCG.............................................  18        7.34
............CCUGUAGCUGCCAAGGGGC..............................................  3         1.33
............CCUGUAGCUGCCAAGGGGCGCA...........................................  2         0.467
............CCUGUAGCUGCCAAGGGGCGC............................................  1         0.233
.............CUGUAGCUGCCAAGGGGCG.............................................  10        3.59
.............................................CCCCUCGGCUGCUACAUUGUAU..........  30        8.87
.............................................CCCCUCGGCUGCUACAUUGUA...........  3         0.7
..............................................CCCUCGGCUGCUACAUUGUAU..........  1         0.233
UCAGUUGCACACCCUGUAGCUGCCAAGGGGCGCAGCUUAAUUCCGCCCCUCGGCUGCUACAUUGUAUGCUACUGAAU
(((((.(((.((..((((((.(((.(((((((...........))))))).))).))))))..)).))).))))).. (-40.40)

Filter reads

by experiment

Accession	Read count	Tissue	Link	Comment	Reference
ER0000000268	38	whole body	GEO : GSM449725	5th-instar day-3 larvae	[ Liu S et al.]
ER0000000269	13308	anterior silk glands	GEO : GSM449726	5th-instar day-3 larvae	[ Liu S et al.]
ER0000000270	3165	posterior silk glands	GEO : GSM449727	5th-instar day-3 larvae	[ Liu S et al.]

References

1. PMID:20199675 "MicroRNAs of Bombyx mori identified by Solexa sequencing" Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q BMC Genomics. 11:148(2010).