miRNA Search Results

Deep sequencing reads for mature sequence MIMAT0017449
Stem-loop ID	aly-MIR164a
Mature ID	aly-miR164a-5p
Reads	aly-miR164a-5p aly-miR164a-3p Count RPM (mean number of reads per million) ..UGGAGAAGCAGGGCACGUGCA........................................................ 77 3.2e+03 ..UGGAGAAGCAGGGCACGUG.......................................................... 1 41.6 ...GGAGAAGCAGGGCACGUGCA........................................................ 2 83.2 GUUGGAGAAGCAGGGCACGUGCAAACCAACAAACACGAAAUCCGUCUCAUGUGUUUUGCACGUACUCCCCUUCUCCAAC ((((((((((..(((.(((((((((.((......(((.....)))......)).))))))))).)))..)))))))))) (-34.60)

 aly-miR164a-5p                                          aly-miR164a-3p          Count     RPM (mean number of reads per million)
..UGGAGAAGCAGGGCACGUGCA........................................................  77        3.2e+03
..UGGAGAAGCAGGGCACGUG..........................................................  1         41.6
...GGAGAAGCAGGGCACGUGCA........................................................  2         83.2
GUUGGAGAAGCAGGGCACGUGCAAACCAACAAACACGAAAUCCGUCUCAUGUGUUUUGCACGUACUCCCCUUCUCCAAC
((((((((((..(((.(((((((((.((......(((.....)))......)).))))))))).)))..)))))))))) (-34.60)

miRBase

Deep sequencing reads for mature sequence MIMAT0017449

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References

References
1	PMID:20407023 "Arabidopsis lyrata small RNAs: transient MIRNA and small interfering RNA loci within the Arabidopsis genus" Ma Z, Coruh C, Axtell MJ Plant Cell. 22:1090-1103(2010).