miRNA Search Results

Deep sequencing reads for mature sequence MIMAT0017496
Stem-loop ID	aly-MIR169f
Mature ID	aly-miR169f-3p
Reads	aly-miR169f-5p aly-miR169f-3p Count RPM (mean number of reads per million) ........................................UGAGCCAAGGAUGACUUGCCG........................................................................................................................... 13 541 UGUAUCAGAGGGUCUUGCAUGAAGGAAUAAAGAAUGGAAUUGAGCCAAGGAUGACUUGCCGGUUUAAACACAACCGGAUUAUGACCAUUGAUUUGGUCUCAUUCACAAUCUGUUGAUUCGUGUCUGGCAAGUUGACCUUGGCUCUGCUUCGUUCUCUAUUCUUCCAUGUUAGAUUCCAGAUAUA ((((((.(.((((((.(((((.(((((((.((((((((...(((((((((.(((((((((((.....((((....((((...(((((......)))))..))))..((((....)))).))))))))))))))).)))))))))...)))))))).))))))).))))).))))))).)))))) (-80.00)

                                       aly-miR169f-5p                                                                        aly-miR169f-3p                                               Count     RPM (mean number of reads per million)
........................................UGAGCCAAGGAUGACUUGCCG...........................................................................................................................  13        541
UGUAUCAGAGGGUCUUGCAUGAAGGAAUAAAGAAUGGAAUUGAGCCAAGGAUGACUUGCCGGUUUAAACACAACCGGAUUAUGACCAUUGAUUUGGUCUCAUUCACAAUCUGUUGAUUCGUGUCUGGCAAGUUGACCUUGGCUCUGCUUCGUUCUCUAUUCUUCCAUGUUAGAUUCCAGAUAUA
((((((.(.((((((.(((((.(((((((.((((((((...(((((((((.(((((((((((.....((((....((((...(((((......)))))..))))..((((....)))).))))))))))))))).)))))))))...)))))))).))))))).))))).))))))).)))))) (-80.00)

miRBase

Deep sequencing reads for mature sequence MIMAT0017496

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References

References
1	PMID:20407023 "Arabidopsis lyrata small RNAs: transient MIRNA and small interfering RNA loci within the Arabidopsis genus" Ma Z, Coruh C, Axtell MJ Plant Cell. 22:1090-1103(2010).