miRNA Search Results

Deep sequencing reads for mature sequence MIMAT0018602
Stem-loop ID	ame-mir-3733
Mature ID	ame-miR-3733
Reads	ame-miR-3733 Count RPM (mean number of reads per million) ...................AGUUUACUAAUCUCGAAUU................................................................. 1 0.907 .....................UUUACUAAUCUCGAAUUUUUC............................................................. 5 4.53 .....................UUUACUAAUCUCGAAUUUUUCU............................................................ 1 0.907 .....................UUUACUAAUCUCGAAUUUU............................................................... 1 0.907 .....................UUUACUAAUCUCGAAUUUUU.............................................................. 1 0.907 ......................UUACUAAUCUCGAAUUUUUCU............................................................ 28 25.4 ......................UUACUAAUCUCGAAUUUUU.............................................................. 14 12.7 ......................UUACUAAUCUCGAAUUUUUCUCGC......................................................... 4 3.63 ......................UUACUAAUCUCGAAUUUUUCUC........................................................... 1 0.907 ......................UUACUAAUCUCGAAUUUUUC............................................................. 1 0.907 ........................ACUAAUCUCGAAUUUUUCU............................................................ 1 0.907 ........................ACUAAUCUCGAAUUUUUCUC........................................................... 1 0.907 .........................CUAAUCUCGAAUUUUUCUC........................................................... 1 0.907 ..........................UAAUCUCGAAUUUUUCUCGC......................................................... 2 1.81 ..................................................................................UAGAUAGAAUAAUGGAAAU.. 1 0.907 GCCGUUUCUGCGAUUACCAAGUUUACUAAUCUCGAAUUUUUCUCGCGCAACGAUCGUUCCUAAGAAGAAAUCGAGUAGAUGGUAGAUAGAAUAAUGGAAAUGU ..((((((((..(((.....((((((((..(((((.(((((((...(.(((....))).)..))))))).)))))....))))))))..)))..)))))))). (-24.30)

                       ame-miR-3733                                                                     Count     RPM (mean number of reads per million)
...................AGUUUACUAAUCUCGAAUU.................................................................  1         0.907
.....................UUUACUAAUCUCGAAUUUUUC.............................................................  5         4.53
.....................UUUACUAAUCUCGAAUUUUUCU............................................................  1         0.907
.....................UUUACUAAUCUCGAAUUUU...............................................................  1         0.907
.....................UUUACUAAUCUCGAAUUUUU..............................................................  1         0.907
......................UUACUAAUCUCGAAUUUUUCU............................................................  28        25.4
......................UUACUAAUCUCGAAUUUUU..............................................................  14        12.7
......................UUACUAAUCUCGAAUUUUUCUCGC.........................................................  4         3.63
......................UUACUAAUCUCGAAUUUUUCUC...........................................................  1         0.907
......................UUACUAAUCUCGAAUUUUUC.............................................................  1         0.907
........................ACUAAUCUCGAAUUUUUCU............................................................  1         0.907
........................ACUAAUCUCGAAUUUUUCUC...........................................................  1         0.907
.........................CUAAUCUCGAAUUUUUCUC...........................................................  1         0.907
..........................UAAUCUCGAAUUUUUCUCGC.........................................................  2         1.81
..................................................................................UAGAUAGAAUAAUGGAAAU..  1         0.907
GCCGUUUCUGCGAUUACCAAGUUUACUAAUCUCGAAUUUUUCUCGCGCAACGAUCGUUCCUAAGAAGAAAUCGAGUAGAUGGUAGAUAGAAUAAUGGAAAUGU
..((((((((..(((.....((((((((..(((((.(((((((...(.(((....))).)..))))))).)))))....))))))))..)))..)))))))). (-24.30)

miRBase

Deep sequencing reads for mature sequence MIMAT0018602

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References

References
1	PMID:20807255 "Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera" Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F Insect Mol Biol. 19:799-805(2010).