miRNA Search Results

Deep sequencing reads for mature sequence MIMAT0020176
Stem-loop ID	dme-mir-4957
Mature ID	dme-miR-4957-3p
Reads	dme-miR-4957-5p dme-miR-4957-3p Count RPM (mean number of reads per million) ..............GCACUCUGCUGGCAGCGCUGUCG............................................... 1 0.233 ..............................................CCAGCUGCCAGCAGCGAGCGG................. 12 0.781 ..............................................CCAGCUGCCAGCAGCGAGCGGU................ 11 0.943 ..............................................CCAGCUGCCAGCAGCGAGCG.................. 5 0.12 ...............................................CAGCUGCCAGCAGCGAGCGGUA............... 1 0.235 ................................................AGCUGCCAGCAGCGAGCGGUACA............. 9 1.68 ................................................AGCUGCCAGCAGCGAGCGGUAC.............. 2 0.274 ................................................AGCUGCCAGCAGCGAGCGGUA............... 1 0.147 .................................................GCUGCCAGCAGCGAGCGGUAC.............. 1 0.123 ...................................................UGCCAGCAGCGAGCGGUACA............. 2 0.0418 UCGUUGUAUUUUACGCACUCUGCUGGCAGCGCUGUCGGCGUCGCUGCCAGCUGCCAGCAGCGAGCGGUACACUUGCAACUAUCC ..((((((.....(((.(.(((((((((((..((.((((...)))).))))))))))))).).))).......))))))..... (-38.70)

          dme-miR-4957-5p                   dme-miR-4957-3p                           Count     RPM (mean number of reads per million)
..............GCACUCUGCUGGCAGCGCUGUCG...............................................  1         0.233
..............................................CCAGCUGCCAGCAGCGAGCGG.................  12        0.781
..............................................CCAGCUGCCAGCAGCGAGCGGU................  11        0.943
..............................................CCAGCUGCCAGCAGCGAGCG..................  5         0.12
...............................................CAGCUGCCAGCAGCGAGCGGUA...............  1         0.235
................................................AGCUGCCAGCAGCGAGCGGUACA.............  9         1.68
................................................AGCUGCCAGCAGCGAGCGGUAC..............  2         0.274
................................................AGCUGCCAGCAGCGAGCGGUA...............  1         0.147
.................................................GCUGCCAGCAGCGAGCGGUAC..............  1         0.123
...................................................UGCCAGCAGCGAGCGGUACA.............  2         0.0418
UCGUUGUAUUUUACGCACUCUGCUGGCAGCGCUGUCGGCGUCGCUGCCAGCUGCCAGCAGCGAGCGGUACACUUGCAACUAUCC
..((((((.....(((.(.(((((((((((..((.((((...)))).))))))))))))).).))).......))))))..... (-38.70)

miRBase

Deep sequencing reads for mature sequence MIMAT0020176

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References

References
1	PMID:18501606 "Endogenous RNA interference provides a somatic defense against Drosophila transposons" Chung WJ, Okamura K, Martin R, Lai EC Curr Biol. 18:795-802(2008).