Deep sequencing reads for mature sequence MIMAT0020212

Stem-loop ID dme-mir-4979
Mature ID dme-miR-4979-3p
Reads 
                        dme-miR-4979-5p                       dme-miR-4979-3p                                   Count     RPM (mean number of reads per million)
...............................................................AUACAUGUGCCUGUAUAUAUAU........................  9         1.83
................................................................UACAUGUGCCUGUAUAUAUAUU.......................  2         0.466
CAUAGGUGUUAUAUCUAGGCCAAAUAUAUAUACUUGUUCUAUGUAUUAGUUAUUUGCAAAGGAAUACAUGUGCCUGUAUAUAUAUUCGGUAAAAUCACAUCUUUGAAUU
((.((((((.........(((.(((((((((((..((..((((((((..((.......))..)))))))).))..))))))))))).)))......)))))).)).... (-26.66)

Filter reads

by experiment
Accession Read count Tissue Link Comment Reference
ER0000000015 1head GEO : GSM286601 [ Chung WJ et al.]
ER0000000023 2embryo GEO : GSM286613 [ Chung WJ et al.]
ER0000000083 2head GEO : GSM322533 adult female head
ER0000000084 4head GEO : GSM322543 adult male head
ER0000000088 2whole body GEO : GSM360262 0-2 day old pupae
ER0000000100 1whole body GEO : GSM399106 female body
ER0000000115 1head GEO : GSM180328 adult heads (female heads, male heads) [ Ruby JG et al.]
by # mismatches     Display untemplated ends
by read count min max

References

1
PMID:17989254 "Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs" Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC Genome Res. 17:1850-1864(2007).
2
PMID:18501606 "Endogenous RNA interference provides a somatic defense against Drosophila transposons" Chung WJ, Okamura K, Martin R, Lai EC Curr Biol. 18:795-802(2008).