miRBase entry: hsa-mir-20a

Stem-loop hsa-mir-20a


Accession
MI0000076
Symbol
HGNC: MIR20A
Description
Homo sapiens hsa-mir-20a precursor miRNA mir-17
Gene
family?
RF00051; mir-17

Summary
Caution, this is an AI generated summary based on literature. This may have errors. ?

MIR20A is a microRNA that has been implicated in various cellular processes, including the regulation of apoptosis proteins and the modulation of cellular proliferation and migration in the context of cancer [PMC6912041]. Research has shown that atelocollagen-based gene-activated matrices (GAM) containing plasmid DNAs encoding MIR20A (pMIR20A) can be used to enhance cranial bone augmentation in rats, a model relevant to regenerative therapy for jawbone atrophy [PMC7955717]. The expression levels of MIR20A, along with other microRNAs, can be quantified using RT-PCR techniques to assess their relative abundance in different experimental groups [PMC9687337]. Interestingly, the upregulation of SNHG5 has been found to decrease MIR20A levels, which subsequently leads to an increase in apoptosis-related proteins such as BECN1, ATG5, and ATG7 and affects the autophagic process as indicated by LC3‐II/LC3‐I ratios [PMC6912041]. Preliminary experiments have also indicated that atelocollagen-based delivery systems for MIR20A are highly efficient and non-toxic for transfection into cultured mesenchymal stem cells (MSCs), offering an advantage over traditional commercial vectors like lentiviral vectors [PMC7955717].

Literature search
463 open access papers mention hsa-mir-20a
(1949 sentences)

Sequence

992364 reads, 6826 reads per million, 155 experiments
guagcacUAAAGUGCUUAUAGUGCAGGUAGuguuuaguuaucuACUGCAUUAUGAGCACUUAAAGuacugc
((((.(((.(((((((((((((((((.(((...........))))))))))))))))))))..))).))))

Structure
    c   -A                 G   uguu 
guag acU  AAGUGCUUAUAGUGCAG UAG    u
|||| |||  ||||||||||||||||| |||    a
cguc uGA  UUCACGAGUAUUACGUC Auc    g
    a   AA                 -   uauu 


Annotation confidence High
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Genome context
chr13: 91351065-91351135 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from hsa-mir-20a
Name Accession Chromosome Start End Strand Confidence




Disease association
hsa-mir-20a is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID

Biological pathways
hsa-mir-20a is involved in one or more biological pathways:
(Source: Reactome)
Biological reactions
hsa-mir-20a is involved in one or more regulation/signalling events:
(Source: Reactome)

Database links

Mature hsa-miR-20a-5p

Accession MIMAT0000075
Description Homo sapiens hsa-miR-20a-5p mature miRNA
Sequence 8 - UAAAGUGCUUAUAGUGCAGGUAG - 30
Evidence experimental
cloned [1,4-7], Northern [1]
Database links
Predicted targets

Mature hsa-miR-20a-3p

Accession MIMAT0004493
Description Homo sapiens hsa-miR-20a-3p mature miRNA
Sequence 44 - ACUGCAUUAUGAGCACUUAAAG - 65
Evidence experimental
cloned [6]
Database links
Predicted targets

References

  1. PubMed ID: 11679670
    Identification of novel genes coding for small expressed RNAs
    "Lagos-Quintana M, Rauhut R, Lendeckel W, Tuschl T"
    "Science (2001) 294:853-858

  2. PubMed ID: 12554860
    Numerous microRNPs in neuronal cells containing novel microRNAs
    "Dostie J, Mourelatos Z, Yang M, Sharma A, Dreyfuss G"
    "RNA (2003) 9:180-186

  3. PubMed ID: 14573789
    Reduced accumulation of specific microRNAs in colorectal neoplasia
    "Michael MZ, O' Connor SM, van Holst Pellekaan NG, Young GP, James RJ"
    "Mol Cancer Res (2003) 1:882-891

  4. PubMed ID: 15325244
    Altered expression profiles of microRNAs during TPA-induced differentiation of HL-60 cells
    "Kasashima K, Nakamura Y, Kozu T"
    "Biochem Biophys Res Commun (2004) 322:403-410

  5. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  6. PubMed ID: 17616659
    Patterns of known and novel small RNAs in human cervical cancer
    "Lui WO, Pourmand N, Patterson BK, Fire A"
    "Cancer Res (2007) 67:6031-6043

  7. PubMed ID: 15978578
    Identification of human fetal liver miRNAs by a novel method
    "Fu H, Tie Y, Xu C, Zhang Z, Zhu J, Shi Y, Jiang H, Sun Z, Zheng X"
    "FEBS Lett (2005) 579:3849-3854