Accession
MI0000123
Description
Drosophila melanogaster
dme-mir-5 precursor miRNA
Gene family
MIPF0000309;
mir-5
Literature search
10 open access papers mention dme-mir-5
(35 sentences)
(35 sentences)
Sequence
68714
reads,
4680
reads per million, 49 experiments
gcuaAAAGGAACGAUCGUUGUGAUAUGaguuguuuccuaacaUAUCACAGUGAUUUUCCUUUAUAacgc
....(((((((.(((((((((((((((.............)))))))))))))))))))))).......
....(((((((.(((((((((((((((.............)))))))))))))))))))))).......
Structure
---gcua C aguug
AAAGGAA GAUCGUUGUGAUAUG u
||||||| ||||||||||||||| u
UUUCCUU UUAGUGACACUAUac u
cgcaAUA - aaucc
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr2R: 19661158-19661226 [-]
Clustered miRNAs
7 other miRNAs are < 10 kb from dme-mir-5
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dme-miR-5-5p
| Accession | MIMAT0000110 |
| Description | Drosophila melanogaster dme-miR-5-5p mature miRNA |
| Sequence | 5 - AAAGGAACGAUCGUUGUGAUAUG - 27 |
| Evidence |
experimental
cloned [1,3], Northern [1-2], 454 [4-5], Illumina [5] |
| Database links |
|
| Predicted targets |
|
Mature dme-miR-5-3p
| Accession | MIMAT0020786 |
| Description | Drosophila melanogaster dme-miR-5-3p mature miRNA |
| Sequence | 43 - UAUCACAGUGAUUUUCCUUUAUA - 65 |
| Evidence | not_experimental |
| Database links |
|
References
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