Accession
MI0000205
Description
Arabidopsis thaliana
ath-MIR166e precursor miRNA
Gene family
MIPF0000004;
MIR166
Literature search
37 open access papers mention ath-MIR166e
(304 sentences)
(304 sentences)
Sequence
uugaggGGAAUGUUGUCUGGCACGAGGcccuuaacuuagaucuauauuugauuauauauauaugucucuucuuuauucauuagucuauacaugaaugaucauuuuacgguuaaugacgUCGGACCAGGCUUCAUUCCCCucaa
.(((((((((((..((((((..(((.(.(.((((((.((((.(((((..........))))).)))).....((((((((((.....)).)))))))).........)))))).).).)))..))))))..))))))))))).
.(((((((((((..((((((..(((.(.(.((((((.((((.(((((..........))))).)))).....((((((((((.....)).)))))))).........)))))).).).)))..))))))..))))))))))).
Structure
u UU CA G c c uagaucuauauuugauuauauauauaugucucuucu - g ugaggGGAAUG GUCUGG CGA G c uuaacu uuauucau ua u ||||||||||| |||||| ||| | | |||||| |||||||| || c acuCCCCUUAC CGGACC GCU c g aauugg aguaagua au u a UU AG g a u ---------------------------cauuuuacu c a
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
MIR166e, like miR165, is thought to target mRNAs coding for HD-Zip transcription factors including Phabulosa (PHB) and Phavoluta (PHV) that regulate axillary meristem initiation and leaf development [2].
Genome context
chr5: 16775520-16775662 [-]
Database links
Mature ath-miR166e-3p
| Accession | MIMAT0000193 |
| Description | Arabidopsis thaliana ath-miR166e-3p mature miRNA |
| Sequence | 119 - UCGGACCAGGCUUCAUUCCCC - 139 |
| Evidence |
experimental
cloned [1,3], Northern [1], 3'RACE [3], 454 [4-5], MPSS [4], Illumina [6] |
Mature ath-miR166e-5p
| Accession | MIMAT0031882 |
| Description | Arabidopsis thaliana ath-miR166e-5p mature miRNA |
| Sequence | 7 - GGAAUGUUGUCUGGCACGAGG - 27 |
| Evidence | not_experimental |
References
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