Accession
MI0000206
Description
Arabidopsis thaliana
ath-MIR166f precursor miRNA
Gene family
MIPF0000004;
MIR166
Literature search
37 open access papers mention ath-MIR166f
(302 sentences)
(302 sentences)
Sequence
aaguucaggugaaugaugccuggcucgagaccauucaaucucaugaucucaugauuauaacgaugaugaugaugaugUCGGACCAGGCUUCAUUCCCCucaacuu
(((((.(((.((((((.((((((.((((.(.((((..(((((((((((....))))))...)).)))...)))).).)))).)))))).)))))).))).)))))
(((((.(((.((((((.((((((.((((.(.((((..(((((((((((....))))))...)).)))...)))).).)))).)))))).)))))).))).)))))
Structure
c u u c g c -ca - --- u
aaguu agg gaauga gccugg ucga a cauu auc uc augauc c
||||| ||| |||||| |||||| |||| | |||| ||| || ||||||
uucaa uCC CUUACU CGGACC GGCU u guag uag ag uauuag a
c C U A g a uag u caa u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
MIR166f, like miR165, is thought to target mRNAs coding for HD-Zip transcription factors including Phabulosa (PHB) and Phavoluta (PHV) that regulate axillary meristem initiation and leaf development [2].
Genome context
chr5: 17516301-17516405 [+]
Database links
Mature ath-miR166f
| Accession | MIMAT0000194 |
| Description | Arabidopsis thaliana ath-miR166f mature miRNA |
| Sequence | 78 - UCGGACCAGGCUUCAUUCCCC - 98 |
| Evidence |
experimental
cloned [1,3], Northern [1], 3'RACE [3], 454 [4-5], MPSS [4], Illumina [6] |
References
|
