Stem-loop mmu-mir-190a

Accession

MI0000232

Symbol

MGI: Mir190a

Description

Mus musculus mmu-mir-190a precursor miRNA

Literature search

19 open access papers mention mmu-mir-190a
(59 sentences)

Sequence

14711 reads, 92 reads per million, 71 experiments

cugugUGAUAUGUUUGAUAUAUUAGGUuguuauuuaauccaACUAUAUAUCAAGCAUAUUCCUacag
(((((.((((((((((((((((..(((((..........)))))))))))))))))))))..)))))

Structure

     -U                UA     uuau 
cugug  GAUAUGUUUGAUAUAU  GGUug    u
|||||  ||||||||||||||||  |||||     
gacaU  UUAUACGAACUAUAUA  UCAac    u
     CC                --     cuaa 

Annotation confidence Medium

Genome context

chr9: 67236660-67236726 [-]

Mature mmu-miR-190a-5p

• Accession: MIMAT0000220
• Description: Mus musculus mmu-miR-190a-5p mature miRNA
• Sequence: 6 - UGAUAUGUUUGAUAUAUUAGGU - 27
• Evidence: experimental ; cloned [1-2], Illumina [4]

Mature mmu-miR-190a-3p

• Accession: MIMAT0016998
• Description: Mus musculus mmu-miR-190a-3p mature miRNA
• Sequence: 42 - ACUAUAUAUCAAGCAUAUUCCU - 63
• Evidence: experimental ; 454 [3], Illumina [4]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 12554859
   New microRNAs from mouse and human
   "Lagos-Quintana M, Rauhut R, Meyer J, Borkhardt A, Tuschl T"
   "RNA (2003) 9:175-179


3. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


4. PubMed ID: 20668074
   Identification and analysis of expression of novel microRNAs of murine gammaherpesvirus 68
   "Zhu JY, Strehle M, Frohn A, Kremmer E, Hofig KP, Meister G, Adler H"
   "J Virol (2010) 84:10266-10275