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miRBase |
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Stem-loop sequence hsa-mir-204 |
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Accession | MI0000284 (change log) | ||||
Symbol | HGNC:MIR204 | ||||
Description | Homo sapiens miR-204 stem-loop | ||||
Gene family | MIPF0000042; mir-204 | ||||
Literature search |
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191 open access papers mention hsa-mir-204 | ||||
Stem-loop |
ggcuacagucuuucu - - ucg u a u gagaau 5' uca ug ugac uggac ucccuuuguc uccua gccu a ||| || |||| ||||| |||||||||| ||||| |||| u 3' ggu ac acug acuug agggaaacgg agggu cgga a --------------c c u uua c a - ggaagu |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Comments |
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1]. Expression of the excised miR has been validated in zebrafish, and the ends mapped by cloning. Landgraf et al. confirm expression in human [2]. |
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Genome context |
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Database links |
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Mature sequence hsa-miR-204-5p |
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Accession | MIMAT0000265 |
Previous IDs | hsa-miR-204 |
Sequence |
33 - uucccuuugucauccuaugccu - 54 |
Deep sequencing | 84706 reads, 143 experiments |
Evidence | experimental; cloned [2] |
Database links |
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Predicted targets |
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Mature sequence hsa-miR-204-3p |
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Accession | MIMAT0022693 |
Sequence |
72 - gcugggaaggcaaagggacgu - 92 |
Deep sequencing | 2289 reads, 92 experiments |
Evidence | not experimental |
Database links |
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Predicted targets |
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References |
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1 |
PMID:12624257
"Vertebrate microRNA genes"
Science. 299:1540(2003).
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2 |
PMID:17604727
"A mammalian microRNA expression atlas based on small RNA library sequencing"
Cell. 129:1401-1414(2007).
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