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miRBase |
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Stem-loop sequence hsa-mir-216a |
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Accession | MI0000292 (change log) | |||||
Previous IDs | hsa-mir-216 | |||||
Symbol | HGNC:MIR216A | |||||
Description | Homo sapiens miR-216a stem-loop | |||||
Gene family | MIPF0000054; mir-216 | |||||
Literature search |
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53 open access papers mention hsa-mir-216a | |||||
Stem-loop |
---- u u ---------- u cu a ---a u 5' ga ggcug gag uuggc uaaucucag ggc acugugag ugu c || ||||| ||| ||||| ||||||||| ||| |||||||| ||| 3' cu ccgau cuu aaucg auuaggguc cug ugacacuc aca a agca c c uaacgagaca u -u g ccua u |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Comments |
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1]. Expression of the excised miR has been validated in zebrafish, and the 5' end mapped by PCR. The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2]. |
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence hsa-miR-216a-5p |
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Accession | MIMAT0000273 |
Previous IDs | hsa-miR-216;hsa-miR-216a |
Sequence |
19 - uaaucucagcuggcaacuguga - 40 |
Deep sequencing | 105045 reads, 81 experiments |
Evidence | experimental; cloned [2], SOLiD [3] |
Database links |
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Predicted targets |
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Mature sequence hsa-miR-216a-3p |
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Accession | MIMAT0022844 |
Sequence |
58 - ucacaguggucucugggauuau - 79 |
Deep sequencing | 6729 reads, 31 experiments |
Evidence | experimental; SOLiD [3] |
Predicted targets |
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References |
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1 |
PMID:12624257
"Vertebrate microRNA genes"
Science. 299:1540(2003).
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2 |
PMID:17604727
"A mammalian microRNA expression atlas based on small RNA library sequencing"
Cell. 129:1401-1414(2007).
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3 |