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miRBase |
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Stem-loop sequence cel-mir-233 |
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Accession | MI0000308 (change log) | ||||
Description | Caenorhabditis elegans miR-233 stem-loop | ||||
Gene family | MIPF0000312; mir-233 | ||||
Literature search |
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5 open access papers mention cel-mir-233 | ||||
Stem-loop |
aua - uu c c - c u uaac 5' uagc auc ucugucucgc cau c cguugcuc aaua uc a |||| ||| |||||||||| ||| | |||||||| |||| || a 3' gucg uag agauagggcg gua g guaacgag uuau ag c --c g uc u c c - u ugaa |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Database links |
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Mature sequence cel-miR-233-5p |
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Accession | MIMAT0020329 |
Previous IDs | cel-miR-233* |
Sequence |
19 - ucgcccaucccguugcuccaaua - 41 |
Deep sequencing | 24 reads, 9 experiments |
Evidence | experimental; Illumina [6] |
Database links |
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Mature sequence cel-miR-233-3p |
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Accession | MIMAT0000288 |
Previous IDs | cel-miR-233 |
Sequence |
61 - uugagcaaugcgcaugugcggga - 83 |
Deep sequencing | 18776 reads, 17 experiments |
Evidence | experimental; cloned [1], Northern [1], 454 [3], Illumina [4,6], CLIPseq [5] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:12672692
"The microRNAs of Caenorhabditis elegans"
Genes Dev. 17:991-1008(2003).
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2 |
PMID:12747828
"MicroRNAs and other tiny endogenous RNAs in C. elegans"
Curr Biol. 13:807-818(2003).
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3 |
PMID:17174894
"Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans"
Cell. 127:1193-1207(2006).
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5 |
PMID:20062054
"Comprehensive discovery of endogenous Argonaute binding sites in Caenorhabditis elegans"
Nat Struct Mol Biol. 17:173-179(2010).
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6 |