Accession
MI0000357
Description
Drosophila melanogaster
dme-mir-92a precursor miRNA
Gene family
MIPF0000013;
mir-25
Literature search
25 open access papers mention dme-mir-92a
(396 sentences)
(396 sentences)
Sequence
163317
reads,
7392
reads per million, 49 experiments
aauaugaauuucccguAGGACGGGAAGGUGUCAACGUUuugcauuucgaauaaaCAUUGCACUUGUCCCGGCCUAUgggcgguuuguaauaaaca
..((((((((.((((((((.((((((((((.(((.((((............)))).)))))))).))))).)))))))).)))))))).......
..((((((((.((((((((.((((((((((.(((.((((............)))).)))))))).))))).)))))))).)))))))).......
Structure
-----aa u A - U C ugcau
uaugaauu cccguAGG CGGGA AGGUG CAA GUUu u
|||||||| |||||||| ||||| ||||| ||| ||||
auguuugg gggUAUCC GCCCU UUCAC GUU Caaa u
acaaaua c G G - A uaagc
Annotation confidence
High
Do you think this miRNA is real?
Comments
miR-92a was reported independently in references [1] and [2]. Computational prediction followed by northern blotting confirmed that the strand containing the predicted miR is predominantly expressed [1]. Reference [2] confirmed the 5' end of the excised miRNA by cloning and reported a length distribution of 22-25 nt with 22 nt the most commonly expressed.
Genome context
chr3R: 25646506-25646600 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dme-mir-92a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dme-miR-92a-3p
| Accession | MIMAT0000334 |
| Description | Drosophila melanogaster dme-miR-92a-3p mature miRNA |
| Sequence | 55 - CAUUGCACUUGUCCCGGCCUAU - 76 |
| Evidence |
experimental
cloned [2], Northern [3], 454 [4-5], Illumina [5] |
| Database links |
|
| Predicted targets |
|
Mature dme-miR-92a-5p
| Accession | MIMAT0020802 |
| Description | Drosophila melanogaster dme-miR-92a-5p mature miRNA |
| Sequence | 17 - AGGACGGGAAGGUGUCAACGUU - 38 |
| Evidence | not_experimental |
| Database links |
|
References
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