Stem-loop sequence cbr-mir-60

Accession MI0000509
Description Caenorhabditis briggsae miR-60 stem-loop
Gene family MIPF0000298; mir-60
Stem-loop 
u     ag        -   a     a   a   cc 
 ucuug  cuggaaag gug cauaa auc ugu  a
 |||||  |||||||| ||| ||||| ||| |||   
 agaac  gaucuuuu cac guauu uag gca  a
c     cu        a   -     a   c   cg
Get sequence
Deep sequencing
1232 reads, 1 experiments
Comments

This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1,2]. The expression of this miRNA has not been verified in C. briggsae.

Genome context
Coordinates (WS200) Overlapping transcripts
chrII: 8572396-8572467 [+]
intergenic

Mature sequence cbr-miR-60

Accession MIMAT0000479
Sequence

46 -  

uauuaugcacauuuucuagucca

 - 68

Get sequence
Deep sequencing 1232 reads, 1 experiments
Evidence by similarity; MI0000031

References

1
PMID:11679671 "An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans" Lau NC, Lim LP, Weinstein EG, Bartel DP Science. 294:858-862(2001).
2
PMID:11679672 "An extensive class of small RNAs in Caenorhabditis elegans" Lee RC, Ambros V Science. 294:862-864(2001).