miRBase entry: cbr-mir-60

Stem-loop cbr-mir-60


Accession
MI0000509
Description
Caenorhabditis briggsae cbr-mir-60 precursor miRNA
Gene family
MIPF0000298; mir-60


Sequence

uucuugagcuggaaaggugacauaaaaucauguccaagcacgcgaUAUUAUGCACAUUUUCUAGUCCAagac
.(((((.((((((((((((.(((((.(((.(((......))).))).)))))))).))))))))).))))).

Structure
u     a         -   a     a   a   cc 
 ucuug gcuggaaag gug cauaa auc ugu  a
 ||||| ||||||||| ||| ||||| ||| |||   
 agaAC UGAUCUUUU CAC GUAUU Uag gca  a
c     C         A   -     A   c   cg 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1,2]. The expression of this miRNA has not been verified in C. briggsae.

Genome context
chrII: 9414183-9414254 [+]

Database links

Mature cbr-miR-60

Accession MIMAT0000479
Description Caenorhabditis briggsae cbr-miR-60 mature miRNA
Sequence 46 - UAUUAUGCACAUUUUCUAGUCCA - 68
Evidence not_experimental

References

  1. PubMed ID: 11679671
    An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans
    "Lau NC, Lim LP, Weinstein EG, Bartel DP"
    "Science (2001) 294:858-862

  2. PubMed ID: 11679672
    An extensive class of small RNAs in Caenorhabditis elegans
    "Lee RC, Ambros V"
    "Science (2001) 294:862-864