miRBase entry: cbr-mir-71

Stem-loop cbr-mir-71


Accession
MI0000511
Description
Caenorhabditis briggsae cbr-mir-71 precursor miRNA
Gene family
MIPF0000278; mir-71


Sequence

agcugaacgaUGAAAGACAUGGGUAGUGAgacgucggagccucgucguaucacuauucuguuuuucgccgaucaguc
.(((((.((.(((((((((.(((((((((.(((.(((....))).))).)))))))))))))))))).)).))))).

Structure
a     a  a         U         g   u   a 
 gcuga cg UGAAAGACA GGGUAGUGA acg cgg g
 ||||| || ||||||||| ||||||||| ||| |||  
 ugacu gc gcuuuuugu cuuaucacu ugc gcu c
c     a  c         -         a   u   c 


Annotation confidence Not enough data
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Comments
This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1]. The expression of this miRNA has not been verified in C. briggsae.

Genome context
chrI: 2725611-2725687 [-]

Database links

Mature cbr-miR-71

Accession MIMAT0000481
Description Caenorhabditis briggsae cbr-miR-71 mature miRNA
Sequence 11 - UGAAAGACAUGGGUAGUGA - 29
Evidence not_experimental

References

  1. PubMed ID: 11679671
    An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans
    "Lau NC, Lim LP, Weinstein EG, Bartel DP"
    "Science (2001) 294:858-862