Stem-loop sequence cbr-mir-124a

Accession

MI0000525 (change log)

Previous IDs

cbr-mir-124

Description

Caenorhabditis briggsae miR-124 stem-loop

Gene family

MIPF0000021; mir-124

Literature search

2 open access papers mention cbr-mir-124a
(21 sentences)

Stem-loop

   u      --uc    ua      c    uga   a       -   c  g 
5'  uuccag    guca  uggcgu cacc   gug cuuuagu gga au u
    ||||||    ||||  |||||| ||||   ||| ||||||| ||| || a
3'  aggguc    cggu  accgua gugg   cac ggaauca ccu ug u
   u      uuaa    gc      a    -cg   -       a   u  a 

Confidence

Annotation confidence: not enough data

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Comments

This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1]. The expression of this miRNA has not been verified in C. briggsae.

Genome context

• Coordinates (CB4; GCA_000004555.3): chrIV: 8910157-8910254 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0000525

Mature sequence cbr-miR-124a

• Accession: MIMAT0000494
• Previous IDs: cbr-miR-124
• Sequence: 61 - uaaggcacgcggugaaugcca - 81
• Evidence: by similarity; MI0000302