Stem-loop cbr-mir-233

Accession

MI0000530

Description

Caenorhabditis briggsae cbr-mir-233 precursor miRNA

Gene family

MIPF0000312; mir-233

Literature search

1 open access papers mention cbr-mir-233
(1 sentences)

Sequence

aagcauuuuucugucccgcgcaucccuuuguuccaauauucaaaccaguagaaagauuaUUGAGCAAUGCGCAUGUGCGGGAcagauugaauagcug
.(((((((.((((((((((((((.((.((((((.((((.((.............)).)))))))))).).).))))))))))))))..)))).))).

Structure

a   -    -u              c - u      c    u  aaacc 
 agc auuu  ucugucccgcgcau c c uuguuc aaua uc     a
 ||| ||||  |||||||||||||| | | |||||| |||| ||     g
 ucg uaag  agacAGGGCGUGUA G G AACGAG UUau ag     u
g   a    uu              C C U      -    u  aaaga 

Annotation confidence Not enough data

Comments

This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1]. The expression of this miRNA has not been verified in C. briggsae.

Genome context

chrX: 1737027-1737123 [+]

Mature cbr-miR-233

• Accession: MIMAT0000498
• Description: Caenorhabditis briggsae cbr-miR-233 mature miRNA
• Sequence: 60 - UUGAGCAAUGCGCAUGUGCGGGA - 82
• Evidence: not_experimental

References