Stem-loop cbr-mir-234

Accession

MI0000531

Description

Caenorhabditis briggsae cbr-mir-234 precursor miRNA

Gene family

MIPF0000315; mir-234

Sequence

gacucuagcaaagaucaaacgguauuccugagugaauaauaaaaaugaguccauucuaUUAUUGCUCGAGAAUACCCUUugacaagcugaaaagug
.(((.((((...(.(((((.(((((((.(((((.(((((((..((((....)))).)))))))))))).))))))).))))))..))))...))).

Structure

g   --c    aaa a     c       c     g       aa    a 
 acu   uagc   g ucaaa gguauuc ugagu aauaaua  aaug g
 |||   ||||   | ||||| ||||||| ||||| |||||||  ||||  
 uga   gucg   c aguUU CCAUAAG GCUCG UUAUUau  uuac u
g   aaa    -aa -     C       A     -       -c    c 

Annotation confidence Not enough data

Comments

This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1]. The expression of this miRNA has not been verified in C. briggsae.

Genome context

chrII: 319384-319479 [+]

Mature cbr-miR-234

• Accession: MIMAT0000499
• Description: Caenorhabditis briggsae cbr-miR-234 mature miRNA
• Sequence: 59 - UUAUUGCUCGAGAAUACCCUU - 79
• Evidence: not_experimental

References