Stem-loop cbr-mir-251

Accession

MI0000538

Description

Caenorhabditis briggsae cbr-mir-251 precursor miRNA

Gene family

MIPF0000284; mir-251

Sequence

cccaaaugacaucucgUUAAGUAGUGGUGCCGCUCUUAUUagaauuaucaaguaauaagaguuguucgcuacuuaacgagaggaaauuugga
.((((((....((((((((((((((((.((.((((((((((...........)))))))))).))))))))))))))))))....)))))).

Structure

c      gaca                U  C          gaau 
 ccaaau    ucucgUUAAGUAGUGG GC GCUCUUAUUa    u
 ||||||    |||||||||||||||| || ||||||||||    a
 gguuua    agagcaauucaucgcu ug ugagaauaau    u
a      aagg                -  u          gaac 

Annotation confidence Not enough data

Comments

This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1]. The expression of this miRNA has not been verified in C. briggsae.

Genome context

chrX: 5784597-5784688 [-]

Mature cbr-miR-251

• Accession: MIMAT0000506
• Description: Caenorhabditis briggsae cbr-miR-251 mature miRNA
• Sequence: 17 - UUAAGUAGUGGUGCCGCUCUUAUU - 40
• Evidence: not_experimental

References