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miRBase |
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Stem-loop sequence mmu-mir-20a |
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Accession | MI0000568 (change log) | |||||||||||||
Previous IDs | mmu-mir-20 | |||||||||||||
Symbol | MGI:Mir20a | |||||||||||||
Description | Mus musculus miR-20a stem-loop | |||||||||||||
Gene family | MIPF0000001; mir-17 | |||||||||||||
Literature search |
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168 open access papers mention mmu-mir-20a | |||||||||||||
Stem-loop |
g u u --g ucu c -a ua g u u 5' ug ga gu acagcu guag acu aagugcu uagugcag uag gug a || || || |||||| |||| ||| ||||||| |||||||| ||| ||| 3' ac cu ca ugucga cguc uga uucacga auuacguc auc uac g g - - aga --c a aa gc - - c |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence mmu-miR-20a-5p |
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Accession | MIMAT0000529 |
Previous IDs | mmu-miR-20;mmu-miR-20a |
Sequence |
27 - uaaagugcuuauagugcagguag - 49 |
Deep sequencing | 269740 reads, 107 experiments |
Evidence | experimental; cloned [1-3], Illumina [4-5] |
Database links |
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Predicted targets |
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Mature sequence mmu-miR-20a-3p |
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Accession | MIMAT0004627 |
Previous IDs | mmu-miR-20a* |
Sequence |
63 - acugcauuacgagcacuuaaag - 84 |
Deep sequencing | 2581 reads, 91 experiments |
Evidence | experimental; cloned [3], Illumina [4-5] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:12007417
"Identification of tissue-specific microRNAs from mouse"
Curr Biol. 12:735-739(2002).
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2 |
PMID:12919684
"Embryonic stem cell-specific MicroRNAs"
Dev Cell. 5:351-358(2003).
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3 |
PMID:17604727
"A mammalian microRNA expression atlas based on small RNA library sequencing"
Cell. 129:1401-1414(2007).
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4 |
PMID:20215419
"MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing"
Mol Hum Reprod. 16:463-471(2010).
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5 |
PMID:20413612
"Mammalian microRNAs: experimental evaluation of novel and previously annotated genes"
Genes Dev. 24:992-1009(2010).
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