Stem-loop mmu-mir-325

Accession

MI0000597

Symbol

MGI: Mir325

Description

Mus musculus mmu-mir-325 precursor miRNA mir-325

Gene
family

RF03741; mir-325

Literature search

6 open access papers mention mmu-mir-325
(18 sentences)

Sequence

1410 reads, 24 reads per million, 26 experiments

auauagugcuugguuCCUAGUAGGUGCUCAGUAAGUGUuugugacauaauucgUUUAUUGAGCACCUCCUAUCAAucaagcacugugcuaggcucugg
.((((((((((((((..(((.((((((((((((((((..(........)..)))))))))))))))).)))..))))))))))))))...........

Structure

----------a              CC   U                Uu gug 
           uauagugcuugguu  UAG AGGUGCUCAGUAAGUG  u   a
           ||||||||||||||  ||| ||||||||||||||||  |    
           gugucacgaacuAA  AUC UCCACGAGUUAUUUgc  a   c
ggucucggauc              CU   C                uu aua 

Annotation confidence Medium

Genome context

chrX: 105379082-105379179 [-]

Mature mmu-miR-325-5p

• Accession: MIMAT0000558
• Description: Mus musculus mmu-miR-325-5p mature miRNA
• Sequence: 16 - CCUAGUAGGUGCUCAGUAAGUGU - 38
• Evidence: experimental ; Illumina [3-4]

Mature mmu-miR-325-3p

• Accession: MIMAT0004640
• Description: Mus musculus mmu-miR-325-3p mature miRNA
• Sequence: 54 - UUUAUUGAGCACCUCCUAUCAA - 75
• Evidence: experimental ; cloned [2], Illumina [3-4]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


3. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


4. PubMed ID: 14691248
   Identification of many microRNAs that copurify with polyribosomes in mammalian neurons
   "Kim J, Krichevsky A, Grad Y, Hayes GD, Kosik KS, Church GM, Ruvkun G"
   "Proc Natl Acad Sci U S A (2004) 101:360-365