miRBase entry: osa-MIR156i

Stem-loop osa-MIR156i


Accession
MI0000661
Description
Oryza sativa osa-MIR156i precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
119 open access papers mention osa-MIR156i
(652 sentences)

Sequence

372279 reads, 257274 reads per million, 2 experiments
ggUGACAGAAGAGAGUGAGCACacggccgggcggaacggcaccggcggaugugccgucgcggccgcgugcucacugcucugucugucauc
((((((((((((((((((((((.((((((.(....(((((((........)))))))).)))))).))))))))).)))).)))))))))

Structure
         -    -         a      g cgga       cgg 
ggUGACAGA AGAG AGUGAGCAC cggccg g    acggcac   c
||||||||| |||| ||||||||| |||||| |    |||||||    
cuacugucu ucuc ucacucgug gccggc c    ugccgug   g
         g    g         c      g ----       uag 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
The stem-loop sequence represented here is predicted based on homology to miRNAs cloned from Arabidopsis [1]. Its expression has not been verified in rice.

Genome context
Chr2: 24119995-24120084 [-]

Database links

Mature osa-miR156i

Accession MIMAT0000626
Description Oryza sativa osa-miR156i mature miRNA
Sequence 3 - UGACAGAAGAGAGUGAGCAC - 22
Evidence not_experimental
Database links

References

  1. PubMed ID: 12101121
    MicroRNAs in plants
    "Reinhart BJ, Weinstein EG, Rhoades MW, Bartel B, Bartel DP"
    "Genes Dev (2002) 16:1616-1626