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miRBase |
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Stem-loop sequence osa-MIR167c |
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Accession | MI0000678 (change log) | ||||
Description | Oryza sativa miR167c stem-loop | ||||
Gene family | MIPF0000023; MIR167_1 | ||||
Literature search |
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82 open access papers mention osa-MIR167c | ||||
Stem-loop |
u ---- c a -- ucuga a ------gu ----- cug 5' guccaa gggaa gaguga gcugcc agcaugaucuagc augauca caagau gcuc ccaca c |||||| ||||| |||||| |||||| ||||||||||||| ||||||| |||||| |||| ||||| c 3' cggguu cccuu uucacu cgacgg ucguacuggaucg uacuggu guucug cgag ggugu u a guua c c cg uuccg - aucguugu uucua ccu |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence osa-miR167c-5p |
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Accession | MIMAT0000643 |
Previous IDs | osa-miR167c |
Sequence |
17 - ugaagcugccagcaugaucua - 37 |
Deep sequencing | 86656 reads, 2 experiments |
Evidence | by similarity; MI0000208 |
Database links |
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Mature sequence osa-miR167c-3p |
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Accession | MIMAT0022860 |
Sequence |
123 - ggucaugcugcggcagccucacu - 145 |
Deep sequencing | 14 reads, 2 experiments |
Evidence | experimental; Illumina [2] |
Database links |
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References |
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1 |
PMID:12101121
"MicroRNAs in plants"
Genes Dev. 16:1616-1626(2002).
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2 |
PMID:21901091
"Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors"
PLoS Pathog. 7:e1002176(2011).
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