Accession
MI0000679
Description
Oryza sativa
osa-MIR169a precursor miRNA
Gene family
MIPF0000037;
MIR169_2
Literature search
65 open access papers mention osa-MIR169a
(405 sentences)
(405 sentences)
Sequence
5612
reads,
3953
reads per million, 2 experiments
cgccggcggccugacauugggaucggaggccauggugCAGCCAAGGAUGACUUGCCGAucgaucgaucuaucuaugaagcuaagcuagcuggccauggauccauccaucaauuggcaaguuguucuuggcuacaucuuggccccugcuccucauguaaggccggccuguggcg
((((((((((((.((((.((((.(((.(((((.((((.(((((((((((((((((((((.(((.(((..(((((((.(((((...)))))...)))))))..))).))).))))))))))))))))))))).)))).))))).))).)))).)))).))))).)))...))))
((((((((((((.((((.((((.(((.(((((.((((.(((((((((((((((((((((.(((.(((..(((((((.(((((...)))))...)))))))..))).))).))))))))))))))))))))).)))).))))).))).)))).)))).))))).)))...))))
Structure
--- - g u u a u C c c cu --a a
cgcc ggc ggccu acau ggga cgg ggcca ggug AGCCAAGGAUGACUUGCCGAu gau gau aucuaug agcua
|||| ||| ||||| |||| |||| ||| ||||| |||| ||||||||||||||||||||| ||| ||| ||||||| ||||| g
gcgg ccg ccgga ugua uccu guc ccggu cuac ucgguucuuguugaacgguua cua cua uagguac ucgau
ugu g a c c c u a a c cc cgg c
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
The stem-loop sequence represented here is predicted based on homology to miRNAs cloned from Arabidopsis [1]. Its expression has not been verified in rice.
Genome context
Chr1: 8729104-8729276 [+]
Database links
Mature osa-miR169a
| Accession | MIMAT0000644 |
| Description | Oryza sativa osa-miR169a mature miRNA |
| Sequence | 38 - CAGCCAAGGAUGACUUGCCGA - 58 |
| Evidence | not_experimental |
| Database links |
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References
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