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miRBase |
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Stem-loop sequence cel-mir-356a |
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Accession | MI0000755 (change log) | |||||
Previous IDs | cel-mir-356 | |||||
Description | Caenorhabditis elegans miR-356 stem-loop | |||||
Gene family | MIPF0001209; mir-356 | |||||
Literature search |
2 open access papers mention cel-mir-356a | |||||
Stem-loop |
-uaaaguu ugag a u ca - - a aucaa ua 5' uccu aac auguggu gag acg cg aac aauc ug a |||| ||| ||||||| ||| ||| || ||| |||| || a 3' agga uug uacacca cuc ugc gc uug uuag ac u aagacuuu -uga c - ug a a c --gcg uu |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Comments |
This miRNA was predicted by computational analysis of C. elegans and C. briggsae, and expression of the mature microRNA confirmed by PCR amplification, cloning and sequencing. The 5' end of the mature sequence ws mapped by PCR, but the 3' ends have not been experimentally determined. |
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence cel-miR-356a |
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Accession | MIMAT0000698 |
Previous IDs | cel-miR-356 |
Sequence |
26 - uugagcaacgcgaacaaauca - 46 |
Deep sequencing | 1 reads, 1 experiments |
Evidence | experimental; cloned [1], PCR [1] |
Predicted targets |
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References |
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1 |
PMID:15317971
"Patterns of flanking sequence conservation and a characteristic upstream motif for microRNA gene identification"
RNA. 10:1309-1322(2004).
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