miRBase entry: rno-mir-7b

Stem-loop rno-mir-7b


Accession
MI0000837
Description
Rattus norvegicus rno-mir-7b precursor miRNA
Gene family
MIPF0000022; mir-7

Literature search
33 open access papers mention rno-mir-7b
(75 sentences)

Sequence

6968 reads, 38 reads per million, 174 experiments
aggccagaacacaugagccaaugcuaugUGGAAGACUUGUGAUUUUGUUGUucugauaugauaugacaacaagucacagccagccucauagaguggacucccaucaccuu
.(((((.......)).)))....(((((.((.....(((((((((.((((((.((......)).)))))))))))))))....)).))))).((((....))))......

Structure
aggccagaacacaugagccaaug     U  AAGAC         U      c  au 
                       cuaug GG     UUGUGAUUU GUUGUu ug  a
                       ||||| ||     ||||||||| |||||| ||   
                       gauac cc     gacacugaa caacag au  u
----uuccacuacccucagguga     u  -gacc         -      u  ag 


Annotation confidence Not enough data
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Genome context
chr9: 10812432-10812541 [-]

Database links

Mature rno-miR-7b

Accession MIMAT0000780
Description Rattus norvegicus rno-miR-7b mature miRNA
Sequence 29 - UGGAAGACUUGUGAUUUUGUUGU - 51
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414