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miRBase |
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Stem-loop sequence rno-mir-23a |
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Accession | MI0000852 (change log) | |||||||
Description | Rattus norvegicus miR-23a stem-loop | |||||||
Gene family | MIPF0000027; mir-23 | |||||||
Literature search |
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48 open access papers mention rno-mir-23a | |||||||
Stem-loop |
c c c - g g a c 5' gg cgg ugggg uuccugg gaug gauuug ug c || ||| ||||| ||||||| |||| |||||| || a 3' cc guc accuu agggacc uuac cuaaac ac g c a a u g a - u |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
Mature sequence rno-miR-23a-5p |
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Accession | MIMAT0004712 |
Previous IDs | rno-miR-23a* |
Sequence |
10 - gggguuccuggggaugggauuu - 31 |
Deep sequencing | 124 reads, 94 experiments |
Evidence | experimental; cloned [2], SOLiD [3] |
Predicted targets |
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Mature sequence rno-miR-23a-3p |
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Accession | MIMAT0000792 |
Previous IDs | rno-miR-23a |
Sequence |
46 - aucacauugccagggauuucc - 66 |
Deep sequencing | 1059641 reads, 510 experiments |
Evidence | experimental; cloned [1-2], SOLiD [3] |
Predicted targets |
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References |
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1 | |
2 |
PMID:17604727
"A mammalian microRNA expression atlas based on small RNA library sequencing"
Cell. 129:1401-1414(2007).
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3 |
PMID:20403161
"Small RNA expression and strain specificity in the rat"
BMC Genomics. 11:249(2010).
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