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miRBase |
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Stem-loop sequence rno-mir-30c-2 |
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Accession | MI0000871 (change log) | ||||
Description | Rattus norvegicus miR-30c-2 stem-loop | ||||
Gene family | MIPF0000005; mir-30 | ||||
Literature search |
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62 open access papers mention rno-mir-30c-2 | ||||
Stem-loop |
u a uacu u aca gugaaa 5' gag g caga guaaaca ccu cucucagcu a ||| | |||| ||||||| ||| ||||||||| 3' uuc c gucu cauuugu gga gagggucga g - - cucu c --a aagaau |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Database links |
Mature sequence rno-miR-30c-5p |
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Accession | MIMAT0000804 |
Previous IDs | rno-miR-30c |
Sequence |
14 - uguaaacauccuacacucucagc - 36 |
Deep sequencing | 11978233 reads, 511 experiments |
Evidence | experimental; cloned [1-5], SOLiD [6] |
Predicted targets |
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Mature sequence rno-miR-30c-2-3p |
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Accession | MIMAT0005442 |
Previous IDs | rno-miR-30c-2* |
Sequence |
54 - cugggagaaggcuguuuacucu - 75 |
Deep sequencing | 56128 reads, 498 experiments |
Evidence | experimental; cloned [4], SOLiD [6] |
Predicted targets |
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References |
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1 |
PMID:14691248
"Identification of many microRNAs that copurify with polyribosomes in mammalian neurons"
Proc Natl Acad Sci U S A. 101:360-365(2004).
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2 |
PMID:15345052
"Microarray analysis of microRNA expression in the developing mammalian brain"
Genome Biol. 5:R68(2004).
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3 | |
4 |
PMID:17604727
"A mammalian microRNA expression atlas based on small RNA library sequencing"
Cell. 129:1401-1414(2007).
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5 |
PMID:17805466
"Cloning and identification of novel microRNAs from rat hippocampus"
Acta Biochim Biophys Sin (Shanghai). 39:708-714(2007).
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6 |
PMID:20403161
"Small RNA expression and strain specificity in the rat"
BMC Genomics. 11:249(2010).
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