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miRBase |
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Stem-loop sequence rno-mir-101a |
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Accession | MI0000886 (change log) | ||||
Previous IDs | rno-mir-101 | ||||
Description | Rattus norvegicus miR-101a stem-loop | ||||
Gene family | MIPF0000046; mir-101 | ||||
Literature search |
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23 open access papers mention rno-mir-101a | ||||
Stem-loop |
u cuggc a gucca 5' gcc ucaguuaucacagugcug ugcu u ||| |||||||||||||||||| |||| 3' cgg agucaauagugucaugac augg u a uagga - aaauc |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Comments |
The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2]. The ends of the miRNA may be offset with respect to previous annotations. |
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Genome context |
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Database links |
Mature sequence rno-miR-101a-5p |
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Accession | MIMAT0004726 |
Previous IDs | rno-miR-101a* |
Sequence |
10 - ucaguuaucacagugcugaugc - 31 |
Deep sequencing | 11435 reads, 467 experiments |
Evidence | experimental; cloned [2], SOLiD [3] |
Predicted targets |
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Mature sequence rno-miR-101a-3p |
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Accession | MIMAT0000823 |
Previous IDs | rno-miR-101;rno-miR-101a |
Sequence |
47 - uacaguacugugauaacugaa - 67 |
Deep sequencing | 4490657 reads, 514 experiments |
Evidence | experimental; cloned [1-2], SOLiD [3] |
Predicted targets |
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References |
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1 | |
2 |
PMID:17604727
"A mammalian microRNA expression atlas based on small RNA library sequencing"
Cell. 129:1401-1414(2007).
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3 |
PMID:20403161
"Small RNA expression and strain specificity in the rat"
BMC Genomics. 11:249(2010).
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