Stem-loop rno-mir-184

Accession

MI0000929

Description

Rattus norvegicus rno-mir-184 precursor miRNA

Gene family

MIPF0000059; mir-184

Literature search

18 open access papers mention rno-mir-184
(154 sentences)

Sequence

4143 reads, 79 reads per million, 386 experiments

cacuuucccuuaucaguuuuccagccagcuuugugacuguaaauguUGGACGGAGAACUGAUAAGGGUaagugacug
(((((.((((((((((((((((..(((((((((......)))).)))))..)))))))))))))))).)))))....

Structure

----     u                ag     -    ug 
    cacuu cccuuaucaguuuucc  ccagc uuug  a
    ||||| ||||||||||||||||  ||||| ||||   
    gugaa GGGAAUAGUCAAGAGG  GGUug aaau  c
guca     U                CA     u    gu 

Annotation confidence Not enough data

Genome context

chr8: 97175657-97175733 [-]

Mature rno-miR-184

• Accession: MIMAT0000861
• Description: Rattus norvegicus rno-miR-184 mature miRNA
• Sequence: 47 - UGGACGGAGAACUGAUAAGGGU - 68
• Evidence: experimental ; cloned [1], SOLiD [2]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 20403161
   Small RNA expression and strain specificity in the rat
   Linsen SE, de Wit E, de Bruijn E, Cuppen E
   BMC Genomics (2010) 11:249