Accession
MI0000974
Symbol
MGI:
Mir215
Description
Mus musculus
mmu-mir-215 precursor miRNA mir-192
Gene
family?
family?
RF00130;
mir-192
Literature search
29 open access papers mention mmu-mir-215
(277 sentences)
(277 sentences)
Sequence
70696
reads,
685
reads per million, 91 experiments
agcucucagcaucaacgguguacaggagaAUGACCUAUGAUUUGACAGACcgugcagcuguguaugUCUGUCAUUCUGUAGGCCAAUauucuguaugucacugcuacuuaaa
.(((...))).....((((((((((((...((.(((((((..((((((((.(((((....))))))))))))).)).))))).))...)))))))...))))).........
.(((...))).....((((((((((((...((.(((((((..((((((((.(((((....))))))))))))).)).))))).))...)))))))...))))).........
Structure
agcucucagcaucaa --- gaA A - UU c g
cggug uacagga UG CCUAU GA UGACAGAC gugca c
||||| ||||||| || ||||| || |||||||| |||||
gucac augucuu AC GGAUG CU ACUGUCUg uaugu u
------aaauucauc ugu aUA C U -U - g
Annotation confidence
Medium
Do you think this miRNA is real?
Comments
This mouse miRNA was predicted by computational methods using conservation with human and Fugu rubripes sequences [1]. Expression of the excised miR has been validated in zebrafish, and the 5' end mapped by PCR. The 3' end was not experimentally determined. The mature sequence differs from the human miR-215 at A12->U, and its expression has not been verified in mouse.
Genome context
chr1: 185313581-185313692 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mmu-mir-215
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mmu-miR-215-5p
| Accession | MIMAT0000904 |
| Description | Mus musculus mmu-miR-215-5p mature miRNA |
| Sequence | 30 - AUGACCUAUGAUUUGACAGAC - 50 |
| Evidence |
experimental
Illumina [2-3] |
| Database links |
|
| Predicted targets |
|
Mature mmu-miR-215-3p
| Accession | MIMAT0017169 |
| Description | Mus musculus mmu-miR-215-3p mature miRNA |
| Sequence | 67 - UCUGUCAUUCUGUAGGCCAAU - 87 |
| Evidence |
experimental
Illumina [3] |
| Database links |
|
| Predicted targets |
|
References
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