Accession
MI0001011
Description
Arabidopsis thaliana
ath-MIR395e precursor miRNA
Gene family
MIPF0000016;
MIR395
Literature search
25 open access papers mention ath-MIR395e
(106 sentences)
(106 sentences)
Sequence
auguuuucuagaguuccucugagcacuucauuggagauacaauuuuuuauaaaauaguuuucuaCUGAAGUGUUUGGGGGAACUCccgggcugau
..........((((((((((((((((((((.((((((.((.(((((....))))).)))))))).))))))))))))))))))))..........
..........((((((((((((((((((((.((((((.((.(((((....))))).)))))))).))))))))))))))))))))..........
Structure
auguuuucua u u a u
gaguuccucugagcacuuca uggaga ac auuuu u
|||||||||||||||||||| |||||| || |||||
CUCAAGGGGGUUUGUGAAGU aucuuu ug uaaaa a
uagucgggcc C - a u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This sequence belongs to the miR395 family of miRNAs, which are predicted to target mRNAs coding for ATP sulphurylases [1].
Genome context
chr1: 26272776-26272870 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from ath-MIR395e
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ath-miR395e
| Accession | MIMAT0000942 |
| Description | Arabidopsis thaliana ath-miR395e mature miRNA |
| Sequence | 65 - CUGAAGUGUUUGGGGGAACUC - 85 |
| Evidence |
experimental
5'RACE [1-2], Northern [1], PCR [1], MPSS [3], 454 [4], Illumina [5] |
References
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