Accession
MI0001033
Description
Oryza sativa
osa-MIR395i precursor miRNA
Gene family
MIPF0000016;
MIR395
Literature search
39 open access papers mention osa-MIR395i
(167 sentences)
(167 sentences)
Sequence
25
reads,
19
reads per million, 2 experiments
guuuuaccgggaguucucuucaagcacuucacguagagcuuucuauugacauggagcuuuagaacaauGUGAAGUGUUUGGGGGAACUCuugguaccaa
....((((((((((((.((((((((((((((((((((((..(((((....))))))))))......)))))))))))))))))))))))))))))....
....((((((((((((.((((((((((((((((((((((..(((((....))))))))))......)))))))))))))))))))))))))))))....
Structure
guuu u ------ uu u
uaccgggaguuc cuucaagcacuucacgu agagc ucuau g
|||||||||||| ||||||||||||||||| ||||| |||||
augguuCUCAAG GGGGUUUGUGAAGUGua uuucg aggua a
aacc - acaaga -- c
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This sequence belongs to the miR395 family of miRNAs, which are predicted to target mRNAs coding for ATP sulphurylases [1]. Four clusters of rice miR395 genes are found on chromosomes 4, 8 and 9, and the genes have been renamed to reflect this arrangement [2].
Genome context
Chr8: 3299319-3299417 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from osa-MIR395i
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature osa-miR395i
| Accession | MIMAT0000964 |
| Description | Oryza sativa osa-miR395i mature miRNA |
| Sequence | 69 - GUGAAGUGUUUGGGGGAACUC - 89 |
| Evidence | not_experimental |
| Database links |
|
References
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