Accession
MI0001052
Description
Oryza sativa
osa-MIR398b precursor miRNA
Gene family
MIPF0000107;
MIR398
Literature search
39 open access papers mention osa-MIR398b
(143 sentences)
(143 sentences)
Sequence
81
reads,
59
reads per million, 2 experiments
ggaguuccuacaggggcgagcugggaacacacggugaugaggcggucuggucuuucgUGUGUUCUCAGGUCGCCCCUGccgggacucu
((((((((..(((((((((.((((((((((((((.(((.((.....)).)))..)))))))))))))).)))))))))..))))))))
((((((((..(((((((((.((((((((((((((.(((.((.....)).)))..)))))))))))))).)))))))))..))))))))
Structure
ua g -u g g
ggaguucc caggggcga cugggaacacacgg gau ag c
|||||||| ||||||||| |||||||||||||| ||| || g
ucucaggg GUCCCCGCU GACUCUUGUGUgcu cug uc g
cc G uu g u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This sequence belongs to the miR398 family of miRNAs, which are predicted to target mRNAs coding for copper superoxide dismutases and cytochrome C oxidase subunit V [1].
Genome context
Chr7: 14598617-14598704 [-]
Database links
Mature osa-miR398b
| Accession | MIMAT0000983 |
| Description | Oryza sativa osa-miR398b mature miRNA |
| Sequence | 58 - UGUGUUCUCAGGUCGCCCCUG - 78 |
| Evidence | not_experimental |
| Database links |
|
References
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