Accession
MI0001085
Description
Arabidopsis thaliana
ath-MIR159c precursor miRNA
Gene family
MIPF0000010;
MIR159
Literature search
49 open access papers mention ath-MIR159c
(452 sentences)
(452 sentences)
Sequence
guguaacagaaggagcucccuuccuccaaaacgaagaggacaagauuugaggaacuaaaaugcagaaucuaagaguucaugucuuccucauagagagugcgcgguguuaaaagcuugaagaaagcacacuuuaaggggauugcacgaccucuuagauucucccucuuucucuacauaucauucucuucucuucgUUUGGAUUGAAGGGAGCUCCUuuucuucuuc
.......((((((((((((((((.((((((.(((((((((.(((((.((.(((........(.((((((((((((.((.(((..(((((.(((((.((((......((((....)))).....)))).))))).)))))..))).)).)))))))))))))........))).)).))).))...)))))))))))))))..)))))))))))))))).......
.......((((((((((((((((.((((((.(((((((((.(((((.((.(((........(.((((((((((((.((.(((..(((((.(((((.((((......((((....)))).....)))).))))).)))))..))).)).)))))))))))))........))).)).))).))...)))))))))))))))..)))))))))))))))).......
Structure
guguaac -c a --c - u a acuaaaau c u a cu a a gcggug a
agaaggagcucccuuc uccaaa cgaagagga aa gau ug gga g agaaucuaagag uc ugu uccuc uagag gugc uuaa a
|||||||||||||||| |||||| ||||||||| || ||| || ||| | |||||||||||| || ||| ||||| ||||| |||| ||||
uuuUCCUCGAGGGAAG AGGUUU gcuucucuu uu cua ac ucu c ucuuagauucuc ag acg agggg auuuc cacg aguu g
cuucuuc UU - cuc a u a cuuucucc - c c uu a a -aaaga c
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This sequence is a predicted paralogue of the previously identified miR159/JAW family [1]. It is predicted to target mRNAs coding for MYB and TCP transcription factors.
Genome context
chr2: 18994632-18994856 [+]
Database links
Mature ath-miR159c
| Accession | MIMAT0001015 |
| Description | Arabidopsis thaliana ath-miR159c mature miRNA |
| Sequence | 195 - UUUGGAUUGAAGGGAGCUCCU - 215 |
| Evidence |
experimental
454 [2] |
References
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