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miRBase |
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Stem-loop sequence osa-MIR156k |
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Accession | MI0001090 (change log) | ||||
Description | Oryza sativa miR156k stem-loop | ||||
Gene family | MIPF0000008; MIR156 | ||||
Literature search |
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122 open access papers mention osa-MIR156k | ||||
Stem-loop |
uu ga ug - -g --a - c ga 5' ga g augacaga aga agagagcaca ccc ggcag agcgac c || | |||||||| ||| |||||||||| ||| ||||| |||||| g 3' cu c uacugucu ucu ucucucgugu ggg ccguc ucgcug g ac gc gu a ag gcc a u gc |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Comments |
This sequence is a predicted paralogue of the previously identified miR156 family [1]. It is predicted to target mRNAs coding for Squamosa-promoter Binding Protein (SBP)-like transcription factors. |
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Genome context |
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Database links |
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Mature sequence osa-miR156k |
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Accession | MIMAT0001020 |
Sequence |
11 - ugacagaagagagagagcaca - 31 |
Deep sequencing | 378295 reads, 2 experiments |
Evidence | by similarity; MI0000178 |
Database links |
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References |
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1 |
PMID:15200956
"Computational identification of plant microRNAs and their targets, including a stress-induced miRNA"
Mol Cell. 14:787-799(2004).
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