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miRBase |
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Stem-loop sequence osa-MIR159e |
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Accession | MI0001096 (change log) | ||||
Description | Oryza sativa miR159e stem-loop | ||||
Gene family | MIPF0000010; MIR159 | ||||
Literature search |
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76 open access papers mention osa-MIR159e | ||||
Stem-loop |
g a -a a u u g ---- ua aug g g gu g u c - u c a 5' aug ag aga gagcucccuu cgauccaau cag agaggaag ugg gg ca cu ccg ucaug a accu ugga g g agggc a ||| || ||| |||||||||| ||||||||| ||| |||||||| ||| || || || ||| ||||| | |||| |||| | | ||||| a 3' uac uc ucu cucgagggaa guuagguua guu ucuccuuc acc cc gu ga ggc aguac u uggg acuu c c uccug u - a ga c - - a uguu gc -aa a g uc g u u u c a a |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Comments |
This sequence is a predicted paralogue of the previously identified miR159/JAW family [1]. It is predicted to target mRNAs coding for MYB and TCP transcription factors. |
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Genome context |
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Database links |
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Mature sequence osa-miR159e |
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Accession | MIMAT0001026 |
Sequence |
161 - auuggauugaagggagcuccu - 181 |
Deep sequencing | 1756 reads, 2 experiments |
Evidence | by similarity; MI0000544 |
Database links |
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References |
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1 |
PMID:15200956
"Computational identification of plant microRNAs and their targets, including a stress-induced miRNA"
Mol Cell. 14:787-799(2004).
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