Stem-loop sequence osa-MIR164e

Accession MI0001105
Description Oryza sativa miR164e stem-loop
Gene family MIPF0000045; MIR164
Stem-loop 
uu    ag          ca                     guguagcuucgcugcgcguccaug 
  gugc  gguggagaag  gggcacgugagcggccaucca                        g
  ||||  ||||||||||  |||||||||||||||||||||                         
  cacg  ccaccucuuc  ccuguguacuugcugguaggu                        c
gu    ag          ug                     uugaggucuagugcgcgcaagcgg
Get sequence
Deep sequencing
2903 reads, 4 experiments
Comments

This sequence is a predicted paralogue of the previously identified miR164 family [1]. It is predicted to target mRNAs coding for NAC domain transcription factors.

Genome context
Coordinates (MSU7) Overlapping transcripts
Chr3: 10542157-10542288 [+]
intergenic

Mature sequence osa-miR164e

Accession MIMAT0001035
Sequence

11 -  

uggagaagcagggcacgugag

 - 31

Get sequence
Deep sequencing 2739 reads, 4 experiments
Evidence by similarity; MI0000197

References

1
PMID:15200956 "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA" Jones-Rhoades MW, Bartel DP Mol Cell. 14:787-799(2004).