Stem-loop osa-MIR167j

Accession

MI0001156

Description

Oryza sativa osa-MIR167j precursor miRNA

Gene family

MIPF0000023; MIR167_1

Literature search

83 open access papers mention osa-MIR167j
(247 sentences)

Sequence

81261 reads, 56523 reads per million, 2 experiments

uugugaugugugcaccuuaagcagcUGAAGCUGCCAGCAUGAUCUGaucuuuugcgaucucuuuuuuuaucugaauaaguugauggaaauauuggguuccuaagauucagaucgugcugcgcaguuucaucugcuaaucgaugcacuacacugugaauuu
..(((.((.((((((..(.(((((.((((((((((((((((((((((((((..(.((.(((..((((((((..........))))))))....))).))).)))).))))))))))))).))))))))).))))).)..).)))))))))).........

Structure

-------uu   a  u     - cu a     c         -             -    uu c  u   --uu        ugaa 
         gug ug gugca c  u agcag UGAAGCUGC CAGCAUGAUCUGa ucuu  g ga cuc    uuuuuauc    u
         ||| || ||||| |  | ||||| ||||||||| ||||||||||||| ||||  | || |||    ||||||||     
         cac au cacgu g  a ucguc acuuugacg gucgugcuagacu agaa  c cu ggg    aaagguag    a
uuuaagugu   -  -     a cu a     u         c             u    -u -  u   uuau        uuga 

Annotation confidence Not enough data

Genome context

Chr1: 32686068-32686227 [-]

Mature osa-miR167j

• Accession: MIMAT0001086
• Description: Oryza sativa osa-miR167j mature miRNA
• Sequence: 26 - UGAAGCUGCCAGCAUGAUCUG - 46
• Evidence: not_experimental

References

1. PubMed ID: 15685364
   Computational identification of novel family members of microRNA genes in Arabidopsis thaliana and Oryza sativa
   "Li Y, Li W, Jin YX"
   "Acta Biochim Biophys Sin (Shanghai) (2005) 37:75-87