Stem-loop osa-MIR166m

Accession

MI0001157

Description

Oryza sativa osa-MIR166m precursor miRNA

Gene family

MIPF0000004; MIR166

Literature search

72 open access papers mention osa-MIR166m
(264 sentences)

Sequence

25863 reads, 17946 reads per million, 2 experiments

cucugcuuuggugguuggcugauguucucgguuaagggguuuguugucugguucaaggccuccugcuguccuacaucacauuuuuuuuucuuuguucugaauuucugauggaugugugugugcaugaugcauggcugguggugaccUCGGACCAGGCUUCAUUCCCUuuaaccagcauuugcguuaauaccaucaggcau
...(((((.((((((..((.((((((...((((((((((..((..(((((((((.(((((.((.(((....((((((.((((.....(((........))).....))))))))))...(((((...)))))))).)).))...))).)))))))))..))..)))))))))))))))).))......))))))))))).

Structure

cuc     u      ----ug  u      cuc          uu  uu         a   ---  u  u   ------------gucc      a    uuuuu   uuu 
   ugcuu gguggu      gc gauguu   gguuaagggg  ug  gucugguuc agg   cc cc gcu                uacauc cauu     uuc   g
   ||||| ||||||      || ||||||   ||||||||||  ||  ||||||||| |||   || || |||                |||||| ||||     |||    
   acgga cuacca      cg uuacga   ccaauuUCCC  AC  CGGACCAGG Ucc   gg gg cgg                guguag guag     aag   u
--u     -      uaauug  u      ---          UU  UU         C   agu  u  u   uacguaguacgugugu      -    ucuuu   ucu 

Annotation confidence Not enough data

Genome context

Chr8: 23045356-23045555 [+]

Mature osa-miR166m

• Accession: MIMAT0001087
• Description: Oryza sativa osa-miR166m mature miRNA
• Sequence: 147 - UCGGACCAGGCUUCAUUCCCU - 167
• Evidence: not_experimental

References

1. PubMed ID: 15685364
   Computational identification of novel family members of microRNA genes in Arabidopsis thaliana and Oryza sativa
   "Li Y, Li W, Jin YX"
   "Acta Biochim Biophys Sin (Shanghai) (2005) 37:75-87