Stem-loop sequence gga-mir-99a

Accession MI0001173
Description Gallus gallus miR-99a stem-loop
Gene family MIPF0000025; mir-99
Stem-loop 
cca         a         uc   u       ugaa 
   auuggcaua acccguaga  cga cuugugu    a
   ||||||||| |||||||||  ||| |||||||    u
   ugacugugu uggguaucu  gcu gaacacg    g
gua         c         uc   c       ucac
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Genome context
Coordinates (Gallus-gallus-4.0) Overlapping transcripts
chr1: 98347473-98347553 [+]
intergenic
Clustered miRNAs
< 10kb from gga-mir-99a
gga-mir-99a chr1: 98347473-98347553 [+]
gga-let-7c chr1: 98348226-98348309 [+]
Database links

Mature sequence gga-miR-99a-5p

Accession MIMAT0001103
Previous IDs gga-miR-99a
Sequence

13 -  

aacccguagauccgaucuugug

 - 34

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Evidence experimental; cloned [2]
Predicted targets

Mature sequence gga-miR-99a-3p

Accession MIMAT0006781
Previous IDs gga-miR-99a*
Sequence

50 -  

caagcucgcuucuaugggucu

 - 70

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Evidence experimental; cloned [3]
Predicted targets

References

1
PMID:15592404 "Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution" International Chicken Genome Sequencing Consortium Nature. 432:695-716(2004).
2
" McBride D, Carre W, Law A, Clinton M Unpublished.
3
PMID:18511220 "Identification of novel chicken microRNAs and analysis of their genomic organization" Shao P, Zhou H, Xiao ZD, He JH, Huang MB, Chen YQ, Qu LH Gene. 418:34-40(2008).