miRBase entry: gga-mir-124b

Stem-loop gga-mir-124b


Accession
MI0001252
Description
Gallus gallus gga-mir-124b precursor miRNA
Gene family
MIPF0000021; mir-124

Literature search
13 open access papers mention gga-mir-124b
(39 sentences)

Sequence

417 reads, 7 reads per million, 3 experiments
agccccagcguuuuguguucacugcagaccuugauuuaaugucacacgaUUAAGGCACGCAGUGAAUGCCAaaguuuggggcagccugggcug
.(((((((..(((.(((((((((((...((((((((...........))))))))...))))))))))).)))..)))))))(((....))).

Structure
----------a       cg   u           aga        uaau 
           gccccag  uuu guguucacugc   ccuugauu    g
           |||||||  ||| |||||||||||   ||||||||    u
           cgggguu  aaA CGUAAGUGACG   GGAAUUag    c
gucggguccga       ug   C           CAC        caca 


Annotation confidence Not enough data
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Comments
This sequence is a predicted homologue of a verified miRNA from human, mouse or rat. Its expression has not been validated in chicken.

Genome context
chr23: 2223486-2223578 [+]

Database links

Mature gga-miR-124b

Accession MIMAT0001174
Description Gallus gallus gga-miR-124b mature miRNA
Sequence 50 - UUAAGGCACGCAGUGAAUGCCA - 71
Evidence not_experimental

References

  1. PubMed ID: 15592404
    Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
    "International Chicken Genome Sequencing Consortium"
    "Nature (2004) 432:695-716